Applications for managing geophysical specimen data?

06 Sep 2023
Hi all,
 
Our Virginia Tech Geosciences folks are looking for database applications for managing digital records of their physical geological/paleontological specimens.
 
We had some suggestions of physical archival software applications that might do the job (e.g. ArchiveSpace, PastPerfect, Collective Access). However, they were wondering if there are applications specifically designed for managing geophysical specimen data.
 
I thought this group might have some advice to share! Do you have any suggestions I can pass along?
 
Thanks!
 
-Jon
 
Jonathan Petters Ph.D.
Associate Director, Data Management & Curation Services
Data Services, University Libraries
Virginia Tech
  • Suzanne Maclachlan's picture

    Author: Suzanne Maclachlan

    Date: 07 Sep, 2023

    Hi,

    BOSCORF are currently trialling the software 'Curate' by IKON Science (E&P Knowledge Management Software | Curate from Ikon Science). This may be a suitable solution.

    Best regards,

    Suzie

    Dr Suzanne Maclachlan | Curator

    National Oceanography Centre, Southampton, UK

  • Jens Klump's picture

    Author: Jens Klump

    Date: 07 Sep, 2023

    Hi,

     

    CSIRO has adopted Specify 7 for its collections. https://www.specifysoftware.org/products/specify-7/

     

    It is now being introduced at the Australian National Insect Collection. We are contributing to the Specify Consortium to develop an extension for the management of geological samples. Also, CSIRO is now introducing IGSN IDs as persistent identifiers for its samples across the organisation.

     

    Best regards,

    Jens

     

    --

    Dr Jens Klump BSc(Hons) Dr. rer. nat.

    Group Leader, Exploration Through Cover

    Mineral Resources  |  CSIRO 

    mailto:jens.klump@csiro.au  |  08 6436 8828

    26 Dick Perry Avenue, Kensington WA 6151, Australia

  • Rory Macneil's picture

    Author: Rory Macneil

    Date: 07 Sep, 2023

    Hi,
    Geologists at UiT the University of the Arctic Norway are exploring using RSpace to manage their samples. We worked with them and DataCite as we implemented support for incorporation of IGSN IDs into the RSpace sample management module. Support for IGSN IDs in the context of sample management workflows supported by the RSpace sample management module is described in this just released report.
    Guiding principles for implementing persistent identification and metadata features on research tools to boost interoperability of research data and support sample management workflows
    In recent years, PIDs have evolved quickly from being an interesting but peripheral resource on the fringes of research data management and scholarly communication to being viewed as a core enabling resource for FAIRification of data. There are an increasing number of PIDs, and existing PIDs are being developed and used more widely. However, PID infrastructure is still immature, incomplete, dispersed, and largely siloed. The critical issue of how PIDs can be incorporated into research tools, and into research workflows, has been largely ignored. This project was instituted in order to examine in detail how to incorporate PIDs into research tools, using IGSN DOIS provided by DataCite, and the RSpace digital research platform, as a case study. The core contributors were DataCite and Research Space, which develops and provides RSpace. Also instrumental in the project work were two research institutions that provided requirements, Rothamsted Research and UiT the Arctic University of Norway, and two tools pr
    zenodo.org
    RSpace is provided by Research Space. In October Research Space will complete registration as a DataCite Service Provider and institutions for the first will be able to implement an institution-wide plan for incorporating IGSN IDs into a sample management system.
    Rory Macneil
    CEO
    Research Space
    - Show quoted text -From: ***@***.***-groups.org
    <***@***.***-groups.org> on behalf of jklump via Physical Samples and Collections in the Research Data Ecosystem IG
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    Sent: Thursday, September 7, 2023 9:47 AM
    To: Physical Samples and Collections in the Research Data Ecosystem IG
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    Subject: Re: [physical_samples_and_collections_ig] Applications for managing geophysical specimen data?
    Hi,
    CSIRO has adopted Specify 7 for its collections. https://www.specifysoftware.org/products/specify-7/
    It is now being introduced at the Australian National Insect Collection. We are contributing to the Specify Consortium to develop an extension for the management of geological samples. Also, CSIRO is now introducing IGSN IDs as persistent identifiers for its samples across the organisation.
    Best regards,
    Jens
    --
    Dr Jens Klump BSc(Hons) Dr. rer. nat.
    Group Leader, Exploration Through Cover
    Mineral Resources | CSIRO
    mailto:***@***.*** | 08 6436 8828
    26 Dick Perry Avenue, Kensington WA 6151, Australia
    --
    Full post: https://www.rd-alliance.org/group/physical-samples-and-collections-resea...
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  • Jonathan Petters's picture

    Author: Jonathan Petters

    Date: 08 Sep, 2023

    Thanks very much to all of you who responded with pointers and suggestions!
    Expertise and experience within RDA for the win :)
    I have passed these recommendations onto my local contacts here at Virginia
    Tech.
    A great weekend to you all,
    Jon Petters
    On Wed, Sep 6, 2023 at 12:47 PM JPetters2931 via Physical Samples and
    Collections in the Research Data Ecosystem IG <
    ***@***.***-groups.org> wrote:

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